Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903722.1_cds_XP_016453840.1_47927
CDS Infomation

[gene=LOC107778151] [db_xref=GeneID:107778151] [protein=serine/threonine-protein kinase MARK1-like] [protein_id=XP_016453840.1] [location=join(87929..90662,90965..91233)] [gbkey=CDS]
Sequence

ATGGATCAATTCAGGCAGATTGGTGAGGTAGTAGGGAGTTTGAAGGCTCTAATGGTGTTG
AAACATGATATTCAAATCAATCATAAGCAATGTTGTTTCCTATTAGATATGTATATTCAG
GCTTTTGATACCATTTCTGAAGAAATCAAACATAATTTAAGGTTAAATGAGAGGAATACA
AAGTGGAAAGCTCTTGAGCAACCAATGAAAGAGTTACATAGGATCTTTAAAGAAGGCGAA
TCGTATATAAAATATTGTTTGGATGTGAAAGATTGGTGGGGAAAAGCGATAAGTCTTCAT
ATGAACAAAGATTGTGTTGAGTTTCACATACATAACTTGCTTTGTTGTTTTCCTGTTGTT
ATTGAGGCGATTGAGACGGCTGCAGAAATCTCAGGATTCGACGAGGAGGAAATGCAGAAG
AGAAGAGCTGCAGTTATGAAGAAATATGATAGGGAATTGATCGATCCGAGGTTTTTTCAG
TGGATGTTTGGGAAGCAGTATTTAGTTACGCGAGAAATATGTAGCCGGTTGGAGAGTTCT
TGGAAAGAAGATAGATGGTTGCTTCTTGAAAACATAAGGCAAAAGAAAAATGCAATTGCA
CCAGATACTTTGTTGAAGCACGAGCAAAGGATCGCAGAATTCTTGCTAAGGAAATTAGAT
GGTGTTGAACAAAGTAACAAGATATTGTTACCTAGTTCAATCTTAGTTGGATCAAACGAT
TATCATGTGAAGAGGCGTTTAGGGTCGTGGGGCGGGCATGTTAAGGAGATACAATGGTTA
GGTGAAAATTTTGCTCTGAGGAACTTTTTTGGAGATGTTGAACCATTGCATAGTGAGATT
TCTTTAGTGTTTTCACTTTCACATCCAAACATATTGCAATATCATTGTGGTTTTTATGAT
GAAGAAAGGAAAGAAGGGTACCTTGTTATGGAGCTGATGAACGATACTCTTGCGACGTAT
ATAAAGGAGCATTCTGGCCAAAGGAAGAGACTGCCATTTTCTACGTCTGCTGCAGTTGAT
ATTATGCTTCAGATTGCTCGAGGGATGGAGTATATGCACGCGAGAAAGATCTATCACGGA
GAATTGAACCCGTCTCATGTCCTTCTTAAAGCGAGGAATTCCTCAGCAGAGAGCTATTTT
CACGCGAAAATCAAAGGCTTTGGCTTAACTTCGATTAAAAGTACTTACAAGACTGTCAAC
CACAGCGCGGCTGACTCCATTATATGGTATGCCCCGGAAGTTCTAGCTGAAAATGAAAAG
CCGGGAACCAAATGCACATCCAAGTATACGGAGAAAGCTGATGTCTATAGCTTCGGAATG
ATTTGCTTTCAAATTTTAACGGGCAAAGTTCCATTCGATGAAGGACATTTGCAAGGCGAG
AAAGTGGTCCGAAATATCAGAGCAGGGGAAAGGCCTCTCTTTCCATATCCTTCACCTAAA
TACCTTGTGAACTTAACCAGAAGATGCTGGCATACGAACCCAAATCTTCGCCCACGTTTC
TCATCTCTATGCAGGATTTTACATTATATCAAGAAAGTTCTTGTCATAAATCCAGAACAT
GGCCAGCCTGAAACTGCTCCTCCACTTGTAGACTATTGTGATATCGAGGGTGGCTACTCG
AAGAAATTTTCTGAAGAGGAGAGCACGTGTTTGACACCGGTATCACAGATTCCTTTCCAG
ATGTTTGCTTACCGGCTGATTGAGAAAGAGAAAATTTCTGGAAAGAACTGGGATTCATCA
AATGATGGATTTTCAGTCCATAGGCGAGCATCGATTCTGAGTGATGACGGGCATTTGGCT
GCGATGGATGATCTCTTTCTTGCACCGAGCGATGGAAGGTCAGTTTGCTCAGAGATAATT
GACAGGAAAGATTCAAGATTGTTTGATCAGAGATCAGCTATCTCAGAAATACCACATAGA
AAGCTTTACTTATTCGATCAAGCATCAGTTGGCTCTGAGAGTCCAGACAGGAGATTCTCG
TCTGTAGCAGCAGACGAGAAGTTTTTCTTTGCTGATAGTCCAGATAGGAAAGTACTATCA
ACCCCAATAGTTGATAGGTCACCACGTATCGACACACTAGAGAAAAAGATCATCTCATCA
ATGAGCAAGAACCAAAGACTGAAATTTTCGGACAACCAGGAGAAGGTAATGTCTCCAAAA
GCAGGCGATGAAAAACCTACAGCAAATGTTGCAGCTGAACAAAATTTAGTATCTCCTCGG
ACTACAGAGAAAATAAAATCAGCTGAGCAAAACTTAGTATCTCCTCGGAATTTAGAGAAG
AAAATTTCATCTGATGATCAGAAACTAACTAGTCCTGAGAGTCAAGAAAAGAAACATGCA
TCAGACGATCAGAAACTAACTAGTCCTGAGAGTCAAGAAAAGAAACATGCATCAGACGAT
CAGAAACTAATCAGTTCCGAGGCTCCTGAGAAGAAACATTCATCTGATGATAGGAAATTA
CTACATTCCAAGACTCCAGAAAGGATGAAGTCGTCAACTGTCAATGACAAGCCACTTCAA
GGTGAGCACGCGCAAAGGAGAAGTGTAAGGACTAGGAAAACAAACGAAAAGTTATCGAAG
ATTATAGAGAAGAAAGTTCTGGAAACTAATCAAATTTCAATATCATCCGAGAACACCGAG
ACAACTGCATCCAAGACCAGAAATCAAAAGATAACAGTGAAGAAAGATTCATCGCGCGGC
AAACTGCAGGATACAAAGACTAGCTCTCTAACAGAGAAACTGAATGATGACTCACCAAGA
TCTTCACCAGCTAGAGCTAAGAGAATACATTCATCACCGATGTCTTCACCAACACGAACA
CCAAAGGCATCTTCAAGATCATCACCAGCGATCGCCTCAAAGGGATATGCATATCAATCT
CCAAGTTCGTCGCCACTAAATCCATGTTCTCGATGTGCTAGAGTAAATCGAGAGTGCCAA
CCTTCAGGTATGAGCCCACATATACAACGGAAAGCTCATCCGTCTCATTCAGAGATCGCG
TAG

Peptide Sequence

PEP ID

XP_016453840.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase MARK1-like [Nicotiana tabacum]
Sequence

MDQFRQIGEVVGSLKALMVLKHDIQINHKQCCFLLDMYIQAFDTISEEIKHNLRLNERNT
KWKALEQPMKELHRIFKEGESYIKYCLDVKDWWGKAISLHMNKDCVEFHIHNLLCCFPVV
IEAIETAAEISGFDEEEMQKRRAAVMKKYDRELIDPRFFQWMFGKQYLVTREICSRLESS
WKEDRWLLLENIRQKKNAIAPDTLLKHEQRIAEFLLRKLDGVEQSNKILLPSSILVGSND
YHVKRRLGSWGGHVKEIQWLGENFALRNFFGDVEPLHSEISLVFSLSHPNILQYHCGFYD
EERKEGYLVMELMNDTLATYIKEHSGQRKRLPFSTSAAVDIMLQIARGMEYMHARKIYHG
ELNPSHVLLKARNSSAESYFHAKIKGFGLTSIKSTYKTVNHSAADSIIWYAPEVLAENEK
PGTKCTSKYTEKADVYSFGMICFQILTGKVPFDEGHLQGEKVVRNIRAGERPLFPYPSPK
YLVNLTRRCWHTNPNLRPRFSSLCRILHYIKKVLVINPEHGQPETAPPLVDYCDIEGGYS
KKFSEEESTCLTPVSQIPFQMFAYRLIEKEKISGKNWDSSNDGFSVHRRASILSDDGHLA
AMDDLFLAPSDGRSVCSEIIDRKDSRLFDQRSAISEIPHRKLYLFDQASVGSESPDRRFS
SVAADEKFFFADSPDRKVLSTPIVDRSPRIDTLEKKIISSMSKNQRLKFSDNQEKVMSPK
AGDEKPTANVAAEQNLVSPRTTEKIKSAEQNLVSPRNLEKKISSDDQKLTSPESQEKKHA
SDDQKLTSPESQEKKHASDDQKLISSEAPEKKHSSDDRKLLHSKTPERMKSSTVNDKPLQ
GEHAQRRSVRTRKTNEKLSKIIEKKVLETNQISISSENTETTASKTRNQKITVKKDSSRG
KLQDTKTSSLTEKLNDDSPRSSPARAKRIHSSPMSSPTRTPKASSRSSPAIASKGYAYQS
PSSSPLNPCSRCARVNRECQPSGMSPHIQRKAHPSHSEIA

Transcript Sequence

Gene sequence data has not been registered.